El uso de la teledetección de alta resolución como herramienta para realizar un manejo eficiente del riego en viñedos

The use of plant-based indicators for irrigation management has been widely studied. However, the high number of measurements necessary to identify spatial variability in orchards makes this system difficult to be carried out in large commercial areas. The alternative may be the use of remote sensing. Development of high resolution airborne sensors during the last years brings about new possibilities for detecting plant water status remotely in large areas, and therefore to conduct a more efficient irrigation management for water use. The aim of this PhD thesis is the development of a tool for vineyard spatial variability management, by using high resolution remote sensing imagery. To achieve it, two methodologies to re-design irrigation sectors were firstly compared, with the goal of reducing yield variability. Methods were based on using structural vegetative indices such as Plant Cell Density (PCD) obtained from multispectral images, and leaf water potential measurements (ΨL). It is also presented the development of Crop Water Stress Index (CWSI) for the four grapevine varieties Pinot-noir, Chardonnay, Syrah and Tempranillo, as a tool for quantify vine water status with remote sensing thermal imagery. CWSI was empirically developed with infrared temperature sensors to subsequently generate CWSI maps by acquiring high resolution thermal images. CWSI was developed and validated with ΨL measurements at different phenological stages. Effectiveness aspects to consider such as the optimal moment of the day to detect vine water status with aerial thermal images, the minimum spatial resolution required, or the most appropriated aerial platform, were also studied in this PhD thesis. The implementation of this technology in viticulture will permit to make a more efficient irrigation management taking into account vineyard spatial variability.El uso de indicadores del estado hídrico de los cultivos para la optimización del riego en cultivos leñosos ha sido ampliamente estudiado. Sin embargo, el elevado número de puntos de medidas necesarios para caracterizar la variabilidad espacial de una parcela, hace que sea un sistema de difícil aplicación en grandes extensiones comerciales. La alternativa se basa en el uso de la teledetección. Con el desarrollo en los últimos años de sensores aerotransportados de alta resolución, se abren nuevas posibilidades para detectar el estado hídrico de los cultivos en grandes extensiones y poder realizar un manejo del riego más eficiente. Esta tesis doctoral tiene como principal objetivo desarrollar una herramienta que permita manejar la variabilidad espacial de los viñedos, mediante la utilización de la teledetección de alta resolución. Para tal fin, en primer lugar se han comparado dos metodologías para re-definir los sectores de riego, con el objetivo de disminuir la variabilidad productiva. Los métodos se basaron en el uso de índices estructurales de vegetación, tales como el Plant Cell Density (PCD) obtenidos a partir de imágenes multiespectrales, y con medidas del potencial hídrico de hoja (ΨL). Se presenta también el desarrollo del Crop Water Stress Index (CWSI) en las cuatro variedades de viña Pinot-noir, Chardonnay, Syrah y Tempranillo, como herramienta para cuantificar el estado hídrico mediante la teledetección térmica. El CWSI se desarrolló empíricamente con sensores de temperatura infrarrojo para posteriormente poder generar mapas de CWSI mediante la adquisición de imágenes aéreas térmicas de alta resolución. El CWSI se desarrolló y validó con medidas de ΨL en las distintas fases fenológicas. Aspectos de operatividad, tales como el momento idóneo del día para detectar el estado hídrico mediante imágenes aéreas térmicas, la resolución espacial mínima requerida, o la plataforma aérea más adecuada, también han sido estudiados en esta tesis. La implementación de esta tecnología en la viticultura permitirá realizar un manejo del riego más eficiente teniendo en cuenta la variabilidad espacial del estado hídrico en un viñedo

Performance of the Two-Source Energy Balance (TSEB) Model as a Tool for Monitoring the Response of Durum Wheat to Drought by High-Throughput Field Phenotyping

The current lack of efficient methods for high throughput field phenotyping is a constraint on the goal of increasing durum wheat yields. This study illustrates a comprehensive methodology for phenotyping this crop's water use through the use of the two-source energy balance (TSEB) model employing very high resolution imagery. An unmanned aerial vehicle (UAV) equipped with multispectral and thermal cameras was used to phenotype 19 durum wheat cultivars grown under three contrasting irrigation treatments matching crop evapotranspiration levels (ETc): 100%ETc treatment meeting all crop water requirements (450 mm), 50%ETc treatment meeting half of them (285 mm), and a rainfed treatment (122 mm). Yield reductions of 18.3 and 48.0% were recorded in the 50%ETc and rainfed treatments, respectively, in comparison with the 100%ETc treatment. UAV flights were carried out during jointing (April 4th), anthesis (April 30th), and grain-filling (May 22nd). Remotely-sensed data were used to estimate: (1) plant height from a digital surface model (H, R2 = 0.95, RMSE = 0.18m), (2) leaf area index from multispectral vegetation indices (LAI, R2 = 0.78, RMSE = 0.63), and (3) actual evapotranspiration (ETa) and transpiration (T) through the TSEB model (R2 = 0.50, RMSE = 0.24 mm/h). Compared with ground measurements, the four traits estimated at grain-filling provided a good prediction of days from sowing to heading (DH, r = 0.58–0.86), to anthesis (DA, r = 0.59–0.85) and to maturity (r = 0.67–0.95), grain-filling duration (GFD, r = 0.54–0.74), plant height (r = 0.62–0.69), number of grains per spike (NGS, r = 0.41–0.64), and thousand kernel weight (TKW, r = 0.37–0.42). The best trait to estimate yield, DH, DA, and GFD was ETa at anthesis or during grain filling. Better forecasts for yield-related traits were recorded in the irrigated treatments than in the rainfed one. These results show a promising perspective in the use of energy balance models for the phenotyping of large numbers of durum wheat genotypes under Mediterranean conditions.info:eu-repo/semantics/publishedVersio

Disaggregation of SMAP Soil Moisture at 20 m Resolution: Validation and Sub-Field Scale Analysis

This paper introduces a modified version of the DisPATCh (Disaggregation based on Physical And Theoretical scale Change) algorithm to disaggregate an SMAP surface soil moisture (SSM) product at a 20 m spatial resolution, through the use of sharpened Sentinel-3 land surface temperature (LST) data. Using sharpened LST as a high resolution proxy of SSM is a novel approach that needs to be validated and can be employed in a variety of applications that currently lack in a product with a similar high spatio-temporal resolution. The proposed high resolution SSM product was validated against available in situ data for two different fields, and it was also compared with two coarser DisPATCh products produced, disaggregating SMAP through the use of an LST at 1 km from Sentinel-3 and MODIS. From the correlation between in situ data and disaggregated SSM products, a general improvement was found in terms of Pearson’s correlation coefficient (R) for the proposed high resolution product with respect to the two products at 1 km. For the first field analyzed, R was equal to 0.47 when considering the 20 m product, an improvement compared to the 0.28 and 0.39 for the 1 km products. The improvement was especially noticeable during the summer season, in which it was only possible to successfully capture field-specific irrigation practices at the 20 m resolution. For the second field, R was 0.31 for the 20 m product, also an improvement compared to the 0.21 and 0.23 for the 1 km product. Additionally, the new product was able to depict SSM spatial variability at a sub-field scale and a validation analysis is also proposed at this scale. The main advantage of the proposed product is its very high spatio-temporal resolution, which opens up new opportunities to apply remotely sensed SSM data in disciplines that require fine spatial scales, such as agriculture and water management.info:eu-repo/semantics/publishedVersio

Feasibility of Using the Two-Source Energy Balance Model (TSEB) with Sentinel-2 and Sentinel-3 Images to Analyze the Spatio-Temporal Variability of Vine Water Status in a Vineyard

In viticulture, detailed spatial information about actual evapotranspiration (ETa) and vine water status within a vineyard may be of particular utility when applying site-specific, precision irrigation management. Over recent decades, extensive research has been carried out in the use of remote sensing energy balance models to estimate and monitor ETa at the field level. However, one of the major limitations remains the coarse spatial resolution in the thermal infrared (TIR) domain. In this context, the recent advent of the Sentinel missions of the European Space Agency (ESA) has greatly improved the possibility of monitoring crop parameters and estimating ETa at higher temporal and spatial resolutions. In order to bridge the gap between the coarse-resolution Sentinel-3 thermal and the fine-resolution Sentinel-2 shortwave data, sharpening techniques have been used to downscale the Sentinel-3 land surface temperature (LST) from 1 km to 20 m. However, the accurate estimates of high-resolution LST through sharpening techniques are still unclear, particularly when intended to be used for detecting crop water stress. The goal of this study was to assess the feasibility of the two-source energy balance model (TSEB) using sharpened LST images from Sentinel-2 and Sentinel-3 (TSEB-PTS2+3) to estimate the spatio-temporal variability of actual transpiration (T) and water stress in a vineyard. T and crop water stress index (CWSI) estimates were evaluated against a vine water consumption model and regressed with in situ stem water potential (Ψstem). Two different TSEB approaches, using very high-resolution airborne thermal imagery, were also included in the analysis as benchmarks for TSEB-PTS2+3. One of them uses aggregated TIR data at the vine+inter-row level (TSEB-PTairb), while the other is based on a contextual method that directly, although separately, retrieves soil and canopy temperatures (TSEB-2T). The results obtained demonstrated that when comparing airborne Trad and sharpened S2+3 LST, the latter tend to be underestimated. This complicates the use of TSEB-PTS2+3 to detect crop water stress. TSEB-2T appeared to outperform all the other methods. This was shown by a higher R2 and slightly lower RMSD when compared with modelled T. In addition, regressions between T and CWSI-2T with Ψstem also produced the highest R2.info:eu-repo/semantics/publishedVersio

Using Unmanned Aerial Vehicle and Ground-Based RGB Indices to Assess Agronomic Performance of Wheat Landraces and Cultivars in a Mediterranean-Type Environment

The adaptability and stability of new bread wheat cultivars that can be successfully grown in rainfed conditions are of paramount importance. Plant improvement can be boosted using effective high-throughput phenotyping tools in dry areas of the Mediterranean basin, where drought and heat stress are expected to increase yield instability. Remote sensing has been of growing interest in breeding programs since it is a cost-effective technology useful for assessing the canopy structure as well as the physiological traits of large genotype collections. The purpose of this study was to evaluate the use of a 4-band multispectral camera on-board an unmanned aerial vehicle (UAV) and ground-based RGB imagery to predict agronomic traits as well as quantify the best estimation of leaf area index (LAI) in rainfed conditions. A collection of 365 bread wheat genotypes, including 181 Mediterranean landraces and 184 modern cultivars, was evaluated during two consecutive growing seasons. Several vegetation indices (VI) derived from multispectral UAV and ground-based RGB images were calculated at different image acquisition dates of the crop cycle. The modified triangular vegetation index (MTVI2) proved to have a good accuracy to estimate LAI (R2 = 0.61). Although the stepwise multiple regression analysis showed that grain yield and number of grains per square meter (NGm2) were the agronomic traits most suitable to be predicted, the R2 were low due to field trials were conducted under rainfed conditions. Moreover, the prediction of agronomic traits was slightly better with ground-based RGB VI rather than with UAV multispectral VIs. NDVI and GNDVI, from multispectral images, were present in most of the prediction equations. Repeated measurements confirmed that the ability of VIs to predict yield depends on the range of phenotypic data. The current study highlights the potential use of VI and RGB images as an efficient tool for high-throughput phenotyping under rainfed Mediterranean conditions.info:eu-repo/semantics/publishedVersio

Post-Harvest Regulated Deficit Irrigation in Chardonnay Did Not Reduce Yield but at Long-Term, It Could Affect Berry Composition

Future increases in temperatures are expected to advance grapevine phenology and shift ripening to warmer months, leaving a longer post-harvest period with warmer temperatures. Accumulation of carbohydrates occurs during post-harvest, and has an influence on vegetative growth and yield in the following growing season. This study addressed the possibility of adopting regulated deficit irrigation (RDI) during post-harvest in Chardonnay. Four irrigation treatments during post-harvest were applied over three consecutive seasons: (i) control (C), with full irrigation; (ii) low regulated deficit irrigation for sparkling base wine production (RDIL SP), from harvest date of sparkling base wine, irrigation when stem water potential (Ψstem) was less than −0.9 MPa; (iii) mild regulated deficit irrigation for sparkling base wine production (RDIM SP), from harvest date of sparkling base wine, irrigation when Ψstem was less than −1.25 MPa; (iv) mild regulated deficit irrigation for wine production (RDIM W), from harvest data of wine, irrigation when Ψstem was less than −1.25 MPa. Root starch concentration in full irrigation was higher than under RDI. Yield parameters did not differ between treatments, but differences in berry composition were detected. Considering that the desirable berry composition attributes of white varieties are high in titratable acidity, it would seem inappropriate to adopt RDI strategy during post-harvest. However, in a scenario of water restriction, it may be considered because there was less impact on yield and berry composition than if RDI had been adopted during pre-harvest.info:eu-repo/semantics/publishedVersio

Classification of Different Irrigation Systems at Field Scale Using Time-Series of Remote Sensing Data

Maps of irrigation systems are of critical value for a better understanding of the human impact on the water cycle, while they also present a very useful tool at the administrative level to monitor changes and optimize irrigation practices. This study proposes a novel approach for classifying different irrigation systems at field level by using remotely sensed data at subfield scale as inputs of different supervised machine learning (ML) models for time-series classification. The ML models were trained using ground-truth data from more than 300 fields collected during a field campaign in 2020 across an intensely cultivated region in Catalunya, Spain. Two hydrological variables retrieved from satellite data, actual evapotranspiration ( ETa ) and soil moisture ( SM ), showed the best results when used for classification, especially when combined together, retrieving a final accuracy of 90.1±2.7% . All the three ML models employed for the classification showed that they were able to distinguish different irrigation systems, regardless of the different crops present in each field. For all the different tests, the best performances were reached by ResNET, the only deep neural network model among the three tested. The resulting method enables the creation of maps of irrigation systems at field level and for large areas, delivering detailed information on the status and evolution of irrigation practices.info:eu-repo/semantics/publishedVersio

Accounting for Almond Crop Water Use under Different Irrigation Regimes with a Two-Source Energy Balance Model and Copernicus-Based Inputs

Accounting for water use in agricultural fields is of vital importance for the future prospects for enhancing water use efficiency. Remote sensing techniques, based on modelling surface energy fluxes, such as the two-source energy balance (TSEB), were used to estimate actual evapotranspiration (ETa) on the basis of shortwave and thermal data. The lack of high temporal and spatial resolution of satellite thermal infrared (TIR) missions has led to new approaches to obtain higher spatial resolution images with a high revisit time. These new approaches take advantage of the high spatial resolution of Sentinel-2 (10–20 m), and the high revisit time of Sentinel-3 (daily). The use of the TSEB model with sharpened temperature (TSEBS2+S3) has recently been applied and validated in several study sites. However, none of these studies has applied it in heterogeneous row crops under different water status conditions within the same orchard. This study assessed the TSEBS2+S3 modelling approach to account for almond crop water use under four different irrigation regimes and over four consecutive growing seasons (2017–2020). The energy fluxes were validated with an eddy covariance system and also compared with a soil water balance model. The former reported errors of 90 W/m2 and 87 W/m2 for the sensible (H) and latent heat flux (LE), respectively. The comparison of ETa with the soil water balance model showed a root-mean-square deviation (RMSD) ranging from 0.6 to 2.5 mm/day. Differences in cumulative ETa between the irrigation treatments were estimated, with maximum differences obtained in 2019 of 20% to 13% less in the most water-limited treatment compared to the most well-watered one. Therefore, this study demonstrates the feasibility of using the TSEBS2+S3 for monitoring ETa in almond trees under different water regimes.info:eu-repo/semantics/publishedVersio

Remote Sensing Energy Balance Model for the Assessment of Crop Evapotranspiration and Water Status in an Almond Rootstock Collection

One of the objectives of many studies conducted by breeding programs is to characterize and select rootstocks well-adapted to drought conditions. In recent years, field high-throughput phenotyping methods have been developed to characterize plant traits and to identify the most water use efficient varieties and rootstocks. However, none of these studies have been able to quantify the behavior of crop evapotranspiration in almond rootstocks under different water regimes. In this study, remote sensing phenotyping methods were used to assess the evapotranspiration of almond cv. “Marinada” grafted onto a rootstock collection. In particular, the two-source energy balance and Shuttleworth and Wallace models were used to, respectively, estimate the actual and potential evapotranspiration of almonds grafted onto 10 rootstock under three different irrigation treatments. For this purpose, three flights were conducted during the 2018 and 2019 growing seasons with an aircraft equipped with a thermal and multispectral camera. Stem water potential (Ψstem) was also measured concomitant to image acquisition. Biophysical traits of the vegetation were firstly assessed through photogrammetry techniques, spectral vegetation indices and the radiative transfer model PROSAIL. The estimates of canopy height, leaf area index and daily fraction of intercepted radiation had root mean square errors of 0.57 m, 0.24 m m–1 and 0.07%, respectively. Findings of this study showed significant differences between rootstocks in all of the evaluated parameters. Cadaman® and Garnem® had the highest canopy vigor traits, evapotranspiration, Ψstem and kernel yield. In contrast, Rootpac® 20 and Rootpac® R had the lowest values of the same parameters, suggesting that this was due to an incompatibility between plum-almond species or to a lower water absorption capability of the rooting system. Among the rootstocks with medium canopy vigor, Adesoto and IRTA 1 had a lower evapotranspiration than Rootpac® 40 and Ishtara®. Water productivity (WP) (kg kernel/mm water evapotranspired) tended to decrease with Ψstem, mainly in 2018. Cadaman® and Garnem® had the highest WP, followed by INRA GF-677, IRTA 1, IRTA 2, and Rootpac® 40. Despite the low Ψstem of Rootpac® R, the WP of this rootstock was also high.info:eu-repo/semantics/publishedVersio